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Species belonging to selected taxon:
Citrus sinensis
ABOUT THIS RECORD
ID:
MNEST044832
species:
Citrus sinensis
source:
microPC, original name:
miR164
Taxonomy by NCBI:
Citrus sinensis
Citrus
Rutaceae
Sapindales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGGAGAAGCAGGGCACGTGC
miRNA*
ATGTGCCCTTCTTCCCCA
mismatches:
4
bulges:
0
View larger
pre-miRNA
TGGAGAAGCAGGGCACGTGC
ATTACTAACTCAACCGCACATACATCTACTAACAAAAATTAATTAATCCACACATTTTGAAGAAACCAAATCAAGAAGCA
GCAAGCTCTTTCTGTTGTTATAGCTCAGTCATGAGTTGAGTTATTTCTTC
ATGTGCCCTTCTTCCCCA
dot-bracket secondary structure
.((.((((.((((((((((.
.....(((((((((...........(((.((((((....................((((.......))))...(((((.(
(....)).))))).)))))))))...........)))))))))......)
))))))))).)))).)).
SIMILARITIES
miRBase
csi-MIR164
:
2e-92
PMRD
csi-miR164
:
2e-92
microPC
miR164
:
2e-92
UniProt
no hits
RFAM
MIR164: 0.0000000007
Identical with:
csi-MIR164
from miRBase (
MNEST041221
)
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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